Downregulation of endogenous TRAIL and its effect on the human cancer cell line KELLY [Elektronische Ressource] / Sara Brittingham. Betreuer: Irmela Jeremias
Aus der Kinderklinik und Kinderpoliklinik im Dr. von Haunerschen Kinderspital der Ludwig-Maximilians-Universität München Direktor: Prof. Dr. med. Ch. Klein Abteilung Hämatologie/Onkologie Downregulation of endogenous TRAIL and its effect on the human cancer cell line KELLY Dissertation zum Erwerb des Doktorgrades der Medizin an der Medizinischen Fakultät der Ludwig-Maximilians-Universität zu München vorgelegt von Sara Brittingham aus Warschau 2011 Mit Genehmigung der Medizinischen Fakultät der Universität München Berichterstatter: PD Dr. Irmela Jeremias Mitberichterstatter: PD Dr. Andreas Jung Prof. DrFiedrich-Wilhelm Kreth Dekan: Prof. Dr. Dr. h.c. M. Reiser; FACR, FRCR Tag der mündlichen Prüfung: 24.11.2011 2 3 Meiner Mutter in Dankbarkeit 4 Index 1 INDEX 1 INDEX ..................................................................................................................................... 5 2 ABBREVIATIONS ................................................................................................................... 8 3 INTRODUCTION .................................................................................................................... 9 3.1 BACKGROUND ..............................................................................................................
Aus der Kinderklinik und Kinderpoliklinik im Dr. von Haunerschen Kinderspital der Ludwig-Maximilians-Universität München Direktor: Prof. Dr. med. Ch. Klein
Abteilung Hämatologie/Onkologie
Downregulation of endogenous TRAIL and its effect on the human cancer cell line KELLY Dissertation zum Erwerb des Doktorgrades der Medizin an der Medizinischen Fakultät der Ludwig-Maximilians-Universität zu München
vorgelegt von Sara Brittingham aus Warschau 2011
Mit Genehmigung der Medizinischen Fakultät der Universität München
2
PD Dr. Andreas Jung Prof. Dr. Friedrich-Wilhelm Kreth
Berichterstatter: Mitberichterstatter:Dekan: Tag der mündlichen Prüfung:
24.11.2011
PD Dr. Irmela Jeremias
Prof.Dr.Dr.h.c.M.Reiser;FACR,FRCR
3
Meiner Mutter in Dankbarkeit
4
Index
1INDEX
1.......................................................................................IEXND............................................5..2................8....................................................................AREBBATVINSIO...............................3 9INTRODUCTION ....................................................................................................................3.1BACKGROUND...................................................................................................................... 93.2MULTIPLE BIOLOGICAL FUNCTIONS OFTRAIL........................................................................ 93.3EXPRESSION OFTUMOR NECROSIS FACTOR-RELATED APOPTOSIS-INDUCING LIGAND (TRAIL).....................................................................................................................................103.4TRAILAND ITS RECEPTORS............................................................................................... 113.5APOPTOSIS AND THE PRO-APOPTOTIC EFFECT OF 11TRAIL ....................................................3.6TRAILAS AN ANTI-CANCER DRUG..............................................................................13.........3.7NON-APOPTOTIC EFFECT OFTRAIL.................................................................................... 143.8THE PRO-PROLIFERATIVE EFFECT OFTRAIL ....................................................................... 153.9AIM OF PRESENT WORK....................................................................................................1..64....................................................................................17.................................ETAMLAIR.......4.1CELL LINES........................................................71................................................................4.2OLIGONUCLEOTIDES.......................................................................................................... 184.3ANTIBODIES OFWESTERN BLOT ANALYSIS................91..........................................................4.4KITS........................................19..........................................................................................4.5SOFTWARE.......91.................................................................................................................4.6LABORATORYEQUIPEMENT19................................................................................................4.7MATERIALS OF CELL CULTURE.....20.......................................................................................4.8CHEMICALS....................................................................................................................... 214.9SOLUTIONS/BUFFERS.......................................................................22.................................5...32M........................................ETHODS.................................................................................5.1CELL CULTURE...........................................................................................................23........5.2IN-VITRO ASSAYS............................................................................................................... 235.2.1Stimulation with TRAIL..................................................................................235.2.2Transient transfection....................................................................................245.2.3Caspase inhibition.........................................................................................255
Index
5.3CELL GROWTH ANALYSIS USINGCELLSCREEN.................................................................... 255.4CELL DEATH ANALYSIS USINGFLUORESCENCE ACTIVATED CELL SORTING 26(FACS) ...............5.5ANALYSIS OF TRANSFECTION EFFICIENCY USINGFLUORESCENCE ACTIVATED CELL SORTING(FACS) ....................................................................................................................... 275.6STATISTICALANALYSIS...................................................................................................... 275.7RNA/DNASTUDIES........................................................................................................... 275.7.1RNA Isolation and quantification ...................................................................275.7.2Reverse Transcriptase Reaction...................................................................285.7.3 .................29Quantitative Real-Time Polymerase Chain Reaction (qRT-PCR)5.7.4Analysis of qRT-PCR (crossing point and melting curve analysis) ...............305.8PROTEIN STUDIES..........................................................................................23....................5.8.1 ........................................................................................................32Cell lysis5.8.2SDS-Polyacrylamid Gel Electrophoresis (PAGE) .........................................335.8.3 ..........................................................34Immunoblotting and Immunodetection6RESULTS ............................................................................................................................. 356.1TRAILMEDIATED PROLIFERATION...................................................................................... 356.2DOWNREGULATION OF ENDOGENOUSTRAIL:OPTIMIZATION................................................ 376.2.1Screening human cell lines for endogenous TRAIL expression....................376.2.2Evaluation of siRNA delivery.........................................................................396.2.3Evaluation of siRNA efficiency ......................................................................416.2.3.1Efficiency on RNA level .............................................................................416.2.3.2Efficiency on Protein Level ........................................................................436.3DOWNREGULATION OF ENDOGENOUSTRAIL:SCREENING FOR EFFECTS ON CELL GROWTH............................44........................................................................................................6.4KELLYCELLS AND THE EFFECTS OF DOWNREGULATION OF ENDOGENOUSTRAIL................ 506.4.1Reduction of cell growth................................................................................506.4.2Cell growth reduction is a result of cell death induction ................................536.4.3Soluble TRAIL rescues cell death induced by the downregulation of endogenous TRAIL......................................................................................................566.4.4Cell death is mediated by caspases..............................................................587 61DISCUSSION .......................................................................................................................7.1SUBSTANTIAL EFFECT OF THE DOWN REGULATION OFTRAILON CELL VIABILITY................61...6
Index
7.2CELL-TYPE SPECIFICITY OF THE FUNCTION OF ENDOGENOUSTRAIL .................................... 627.3ROLE OF ENDOGENOUSTRAILFOR CANCER CELLS............................................................ 637.4PRO-SURVIVAL FUNCTION OF SEVERAL MEMBERS OF THETNF-FAMILY................................ 647.5MECHANISMS OF THE PRO-SURVIVAL FUNCTION OFTNF-FAMILY MEMBERS..........................657.6FUTURE PERSPECTIVE....................................................................................................... 657.7POTENTIAL RELEVANCE AS A NOVEL APPROACH OF CANCER THERAPY................................. 66